Install anndata — install_anndata • anndata

Needs to be run after installing the anndata R package.

Usage

install_anndata(method = "auto", conda = "auto")

Arguments

method: Installation method. By default, "auto" automatically finds a method that will work in the local environment. Change the default to force a specific installation method. Note that the "virtualenv" method is not available on Windows.
conda: The path to a conda executable. Use "auto" to allow reticulate to automatically find an appropriate conda binary. See Finding Conda and conda_binary() for more details.

Examples

if (FALSE) {
reticulate::conda_install()
install_anndata()
}